Публикации сотрудника подразделения БД НИОХ СО РАН

Обзоры, статьи в научных журналах

2021

1. S.S. Ovcherenko, O.A. Chinak, A.V. Chechushkov, S.A. Dobrynin, I.A. Kirilyuk, O.A. Krumkacheva, V.A. Richter, E.G. Bagryanskaya
   Uptake of Cell-Penetrating Peptide RL2 by Human Lung Cancer Cells: Monitoring by Electron Paramagnetic Resonance and Confocal Laser Scanning Microscopy
   Molecules 2021, 26(18), 5442 doi:10.3390/molecules26185442, IF=4.41

2019

2. O.A. Krumkacheva, G.Yu. Shevelev, A.A. Lomzov, N.S. Dyrkheeva, A.A. Kuzhelev, V.V. Koval, V.M. Tormyshev, Yu.F. Polienko, M.V. Fedin, D.V. Pyshnyi, O.I. Lavrik, E.G. Bagryanskaya
   DNA complexes with human apurinic/apyrimidinic endonuclease 1: structural insights revealed by pulsed dipolar EPR with orthogonal spin labeling
   Nucleic Acids Research,2019, V. 47, N 15, Pp 7767-7780 doi:10.1093/nar/gkz620, IF=11.147
3. A.A. Malygin, O.A. Krumkacheva, D.M. Graifer, I.O. Timofeev, A.S. Ochkasova, M.I. Meschaninova, A.G. Venyaminova, M.V. Fedin, M. Bowman, G.G. Karpova, E.G. Bagryanskaya
   Exploring the interactions of short RNAs with the human 40S ribosomal subunit near the mRNA entry site by EPR spectroscopy
   Nucleic Acids Research, 2019, V. 47, N 22, Pp 11850-11860 doi:10.1093/nar/gkz1039, IF=11.147
4. K. Sato, R. Hirao, I. Timofeev, O.A. Krumkacheva, E. Zaytseva, O.Yu. Rogozhnikova, V.M. Tormyshev, D.V. Trukhin, E.G. Bagryanskaya, T. Gutmann, V. Klimavicius, G. Buntkowsky, K. Sugisaki, Sh. Nakazawa, H. Matsuoka, K. Toyota, D. Shiomi, T. Takui
   Trityl-Aryl-Nitroxide Based Genuinely g-Engineered Biradicals, as Studied by Dynamic Nuclear Polarization, Multi-Frequency ESR/ENDOR, Arbitrary Wave Generator Pulse Microwave Waveform Spectroscopy and Quantum Chemical Calculations
   The Journal of Physical Chemistry A, 2019, V. 123, N 34, Pp 7507-7517 doi:10.1021/acs.jpca.9b07169, IF=2.641

2017

5. O. Krumkacheva, E. Bagryanskaya
   EPR-based distance measurements at ambient temperature
   Journal of Magnetic Resonance, 2017, V. 280, Pp 117-126 doi:10.1016/j.jmr.2017.02.015, IF=2.431

2016

6. A.A. Kuzhelev, G. Yu. Shevelev, O.A. Krumkacheva, V.M. Tormyshev, D.V. Pyshnyi, M.V. Fedin, E.G. Bagryanskaya
   Saccharides as Prospective Immobilizers of Nucleic Acids for Room-Temperature Structural EPR Studies
   J. Phys. Chem. Lett., 2016, V. 7, N 12, pp 2544-2548 doi:10.1021/acs.jpclett.6b01024, IF=8.538

Тезисы докладов на конференциях

2021

1. E. Bagryanskaya, N. Asanbaeva, O. Krumkacheva, V. Tormushev
   TRITYL RADICALS AS SPIN LABELS
   V Международная конференция «Современные синтетические методологии для создания лекарственных препаратов и функциональных материалов», МОСМ 2021, г. Екатеринбург, Россия, 8-12 ноября 2021 г, Сборник тезисов, PL-13

2019

2. K. Sato, R. Hirao, I. Timofeev, O. Krumkacheva, E. Zaytseva, O. Rogozhnikova, V. Tormyshev, D. Trukhin, E. Bagryanskay, T. Gutmann, V. Klimavicius, G. Buntkowsky, K. Sugisaki, S. Nakazawa, H. Matsuoka, K. Toyota, D. Shiomi, T. Takui
   Multi-Frequency EPR/ENDOR, DNP and AWG Pulse MW Spectroscopy of g-Engineered Trityl-Aryl-Nitroxide biradicals
   Int. Conference "Magnetic Resonance - Current State and Future Perspectives" and satellite XXI International Youth Scientific School "Actual problems of magnetic resonance and its application", September 23-27, 2019 Kazan, Russia, , Book of Abst. P. 173
3. O.A. Krumkacheva, I.O. Timofeev, L.V. Politanskaya, Yu.F. Polienko, E.V. Tretyakov, O.Yu. Rogozhnikova, D.V. Trukhin, V.M. Tormyshev, A.S. Chubarov, E.G. Bagryanskaya, M.V. Fedin
   Triplet Fullerenes as Prospective Spin Labels for Nanoscale Distance Measurements by Pulsed Dipolar EPR
   Int. Conference "Magnetic Resonance - Current State and Future Perspectives" and satellite XXI International Youth Scientific School "Actual problems of magnetic resonance and its application", September 23-27, 2019 Kazan, Russia, , Book of Abst. P. 146
4. E.G. Bagryanskaya, O.A. Krumkacheva, G. Shevelev, A. Lomzov, N. Dyrkheeva, A.A. Kuzhelev, V.M. Tormyshev, Yu. Polienko, M. Fedin, D. Pyshnyi, O. Lavrik, A. Chubarov, T. Godovikova
   DNA and RNA Complexes with Human Proteins : Structural Insights revealed by Pulsed Dipolar EPR with Orthogonal Spin Labeling
   Int. Conference "Magnetic Resonance - Current State and Future Perspectives" and satellite XXI International Youth Scientific School "Actual problems of magnetic resonance and its application", September 23-27, 2019 Kazan, Russia, , Book of Abst. P. 136
5. E. Zaytseva, I. Timofeev, O. Krumkacheva, D. Parkhomenko, D. Mazhukin, K. Sato, H. Matsuoka, T. Takui, E. Bagryanskaya
   EPR and DEER characterization of new mixed weakly coupled nitroxide triradicals for molecular three-spin qubits
   International conference ORGEL-2019, 23-29 Sept., Novosibirsk, Russia, Book of abst. PP-45, page 101
6. K. Sato, R. Hirao, I. Timofeev, O. Krumkacheva, E.V. Zaitseva, V.M. Tormyshev, D.V. Trukhin, O.Yu. Rogozhnikova, D.A. Parkhomenko, E. Bagryanskaya, T. Gutmann, V. Klimavicius, G. Buntkowsky, K. Sugisaki, Sh. Nakazawa, H. Matsuoka, K. Toyota, D. Shiomi, T. Takui
   Trityl-Aryl-Niroxide Based Genuinely g-Engineered Biradicals, as Studied by DNP, Multi-Frequency ESR/ENDOR, AWG Pulse MW Spectroscopy and Quantum Chemical Calculations
   International conference ORGEL-2019, 23-29 Sept., Novosibirsk, Russia, Book of abst. PP-39, page 95
7. I.O. Timofeev, A.S. Spitsina, N.Sh. Lebedeva, O.I. Koifman, A.S. Chubarov, M.V. Fedin, E.G. Bagraynskaya, O.A. Krumkacheva
   EPR studies of complexes of photosensitizers with albumin promising in photodynamic therapy of cancer
   В книге: Биотехнология - медицине будущего Материалы всероссийской мультиконференции с международным участием. Новосибирск, 2019. С. 139.
8. E. Bagryanskaya, O. Krumkacheva
   Trityl Radicals as SpinLabels
   The 52nd Annual International Meeting of the ESR Spectroscopy Group of the Royal Society of Chemistry, April , 7- 11, 2019, Glasgow, UK, Book of Abst., P1.

2018

9. O. Krumkacheva, I. Timofeev, L. Politanskaya, E. Tretyakov, E. Bagryanskaya, M. Fedin
   OR4 - Dipolar EPR spectroscopy of fullerene-based spin labels
   APES-IES 20018, Brisbane, Australia, 23 - 27 September 2018, Book of Abstr., P. 53
10. E. Zaytseva, O. Krumkacheva, D. Mazhukin, K. Sato, H. Matsuoka, T. Takui, E.G. Bagryanskaya
    New mixed nitroxide triradicals for quantum computing
    VIII International Conference "High Spin Molecules and Molecular Magnets" MolMag-2018; 17 - 21 September 2018 in Astrakhan, Russia, Book of Abstr., P. 186
11. E. Zaytseva, O. Krumkacheva, D. Mazhukin, K. Sato, H. Matsuoka, T. Takui, E. Bagryanskaya
    Synthesis and EPR characterization of new mixed nitroxide triradicals
    III International conference "Spin physics, spin chemistry and spin technology" (SPCT-2018), September 10 - 15, 2018, Novosibirsk, Russia, Book of Abstr., p. 130
12. A.A. Kuzhelev, O.A. Krumkacheva, G.Yu. Shevelev, M. Yulikov, M.V. Fedin, E.G. Bagryanskaya
    AB16 - Room-Temperature Distance Measurements using RIDME and Orthogonal Spin Labels Trityl/Nitroxide
    APES-IES 20018, Brisbane, Australia, 23 - 27 September 2018, Book of Abstr., P. 70
13. A.A. Kuzhelev, O.A. Krumkacheva, G.Yu. Shevelev, M. Yulikov, M.V. Fedin, E.G. Bagryanskaya
    Room-Temperature RIDME Measurements using Orthogonal Spin Labels Trityl/Nitroxide
    III International conference "Spin physics, spin chemistry and spin technology" (SPCT-2018), September 10 - 15, 2018, Novosibirsk, Russia, Book of Abstr., p.64
14. O.A. Krumkacheva, I.O. Timofeev, A.A. Kuzhelev, A.A. Malygin, D.M. Graifer, M.I. Meschaninova, A.G. Ven'yaminova, M.V. Fedin, G.G. Karpova, E.G. Bagryanskaya
    EPR study of human ribosome complexes modeling ribonucleoproteins formed during biogenesis and translation
    III International conference "Spin physics, spin chemistry and spin technology" (SPCT-2018), September 10 - 15, 2018, Novosibirsk, Russia, Book of Abstr., p.63
15. Ю. Тен, Д. Стась, Е. Мостович, О. Крумкачева, Ю. Гатилов, Д. Мажукин
    Синтез новых симметричных гибридных феноксил-нитроксильных дирадикалов с использованием Pd-катализируемых реакций кросс-сочетания
    Молодёжная научная школа-конференция "Актуальные проблемы органической химии", 09-16 Марта, 2018, Шерегеш, Кемеровская обл. Сборник тезисов, стр. 174
16. A. Кужелев, Г. Шевелев, E. Гуляк, A. Ломзов, O. Крумкачева, M. Купрюшкин, В. Тормышев, M. Федин, Д. Пышный, Е. Багрянская
    Новый подход к присоединению триарилметильных меток к ДНК для структурных ЭПР исследований
    Молодёжная научная школа-конференция "Актуальные проблемы органической химии", 09-16 Марта, 2018, Шерегеш, Кемеровская обл. Сборник тезисов, стр. 62
17. Е.Г. Багрянская, О.А. Крумкачева, А.А. Кужелев, И. Тимофеев, М.В. Федин, А.А. Малыгин, Д.М. Грайфер, Г.Г. Карпова
    Исследование многокомпонентных супармолекулярных комплексов рибосом с РНК методом импульсной дипольной ЭПР спектроскопии
    Молодёжная научная школа-конференция "Актуальные проблемы органической химии", 09-16 Марта, 2018, Шерегеш, Кемеровская обл. Сборник тезисов, стр. 20

2017

18. M. Ivanov, O. Krumkacheva, S. Veber, S. Prikhod'ko, N. Adonin, E. Bagryanskaya, S. Dzuba, M. Fedin
    Microstructure of room-temperature ionic liquids studied by EPR
    XI Japanese-Russian Workshop on Open Shell Compounds and Molecular Spin Devices, Awaji Island, Japan,November 12-15, 2017, Book of Abst., 3PM-17, P. 57
19. O.A. Krumkacheva, I.O. Timofeev, A.A. Kuzelev, A.A. Malygin, D.M. Graifer, M.I. Meschaninova, A.G. Ven'yaminiva, M.V. Fedin, G.G. Karpova, E.G. Bagryanskaya
    Structural rearrangement in mRNA upon its bonding ti human 80S ribosomes revealed by EPR spectroscopy
    XI Japanese-Russian Workshop on Open Shell Compounds and Molecular Spin Devices, Awaji Island, Japan,November 12-15, 2017, Book of Abst., 3PM-5, P. 43
20. D. Mazhukin, E. Zaytseva, Yu. Ten, E. Tretyakov, E. Mostovich, O. Krumkacheva, D. Stass
    Development of Synthetic Approaches and Preparation of Hetero bi- and tri-Nitroxyl Radicals with Various Structural Types of Paramagnetic Centers
    XI Japanese-Russian Workshop on Open Shell Compounds and Molecular Spin Devices, Awaji Island, Japan,November 12-15, 2017, Book of Abst., 2AM-3, P. 7 2017, 2AM-3, p. 7. (приглашённый, устный доклад)
21. E.G. Bagryanskaya, O.A. Krumkacheva, E. Babailova, A.A. Malygin, D.M. Graifer, M.I. Meschaninova, A.G. Ven'yaminova, A. Kuzhelev, I. Timofeev, M.V. Fedin, G.G. Karpova
    EPR study of supramolecular assemblies of human ribosome and RNAs doubly spin-labeled
    SPIN-2017, the 8th Conference on Nitroxide Radicals, Padova, Italy, September 10-14, 2017, Book of Abstacts, Talk 2, P. 4
22. D.V. Trukhin, A.A. Kuzhelev, M.V. Fedin, O.A. Krumkacheva, G.Yu. Shevelev, D.V. Pyshnyi, A.A. Lomzov, O.Yu. Rogozhnikova, V.M. Tormyshev, E.G. Bagryanskaya
    TAM spin labels and pulsed ESR in studying DNA duplexes
    Всероссийская научная конференция «Современные проблемы органической химии», 5-9 июня 2017 г., Новосибирск, стр. 301

2015

23. А.А. Кужелев, О.А. Крумкачева
    ПРИМЕНЕНИЕ ТРИТИЛЬНЫХ РАДИКАЛОВ ДЛЯ СТРУКТУРНЫХ ИССЛЕДОВАНИЙ БИОПОЛИМЕРОВ МЕТОДОМ ИМПУЛЬСНОГО ЭПР
    Международная научная студенческая конференция МНСК-2015, Новосибирск, 11-17 апреля, 2015, с. 77
24. A.A. Kuzhelev, O.A. Krumkacheva, O.Yu. Rogozhnikova, V.M. Tormyshev, M.V. Fedin, E.G. Bagryanskaya
    Development of Spin Labels Based on Triarylmethyl Radicals: Pulse and CW EPR Study
    Book of Abstracts of the Siberian Youth Conference "Current Topics in Organic Chemistry", Sheregesh, Russia. March 21-27, 2015, P.158

2014

25. A.A. Kuzhelev, E.G. Bagryanskaya, V.M. Tormyshev, D.V. Pyshnyi, G.Yu. Shevelev, A.A. Lomzov, O.A. Krumkacheva, M.V. Fedin, O.Yu. Rogozhnikova, D.V. Trukhin, T.I. Troitskaya
    A Direct Acess to Diversely Monosubstituted TAMs Through Nucleophilic Qquenching of Tris-(Tetrathiaaryl)methyl Cations
    VII International Conference on Nitroxide Radicals (SPIN-2014). Zelenogradsk. September 14-20, 2014.P.53
26. A.A. Kuzhelev, O.A. Krumkacheva, O.Yu. Rogozhnikova, V.M. Tormyshev, E.G. Bagryanskaya
    Development of spin labels on triarylmethyl radicals: pulse and CW EPR study
    III School for young scientists "Magnetic Resonance and Magnetic Phenomena in Chemical and Biological Physics", Novosibirsk, Russia, 7-11 September 2014, Book of Abstracts, p.68.

2013

27. E.G. Bagryanskaya, M.V. Fedin, A.M. Sheveleva, O. Krumkacheva, I.A. Kirilyuk, Y.F. Polienko, I.A. Grigor'ev, D.I. Kolokolov, A.G. Stepanov, S.R. A. Marque
    Application of nitroxides as spin probes in functional materials and in biochemistry
    Book of abstracts of the 7th Japanese - Russian Workshop on Open Shell Compounds and Molecular Spin Devices, Awaji Yumebutai International Conference Center, Awaji Island, Japan, 17-20 November 2013, P.12 (приглашенный доклад)
28. Г.Г. Карпова, И.А. Григорьев, Е.Г. Багрянская, И.А. Кирилюк, О.А. Крумкачева, М.В. Федин, Ю.В. Полиенко, Е.С. Бабайлова, А.И. Иванов, А.А. Малыгин
    Новые 2,5-бис(спирогекса)-замещенные пирролидиновые и пирролиновые радикалы как спиновые метки: исследование свойств и применение для измерения расстояний в рибо-нуклеотидах
    Материалы III Всероссийской конференция по органической химии, пос. Репино, Санкт-Петербург, 2013, (устный доклад)
29. R. Strizhakov, O. Krumkacheva, I. Kirilyuk, Y. Polienko, Y. Gatilov, I. Grigoriev, E. Bagryanskaya
    EPR Study of 2,5-spirocyclohexyl-substituted Nitroxides as Spin Labels
    Book of abstracts of the 6th Advanced EPR School of EFEPR, Weizmann University, Rehovot, 2013, 45