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Новосибирский институт органической химии им. Н.Н. Ворожцова
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Публикации

В журнале Dalton Transactions (IF 4,39) опубликована статья с участием сотрудников Института    Е.Б. Николаенковой (нс ЛГетс) и д.х.н.А.Я. Тихонова (гнс ЛГетс):

N-Hydroxy–N-oxide photoinduced tautomerization and excitation wavelength dependent luminescence of ESIPT-capable zinc(ii) complexes with a rationally designed 1-hydroxy-2,4-di(pyridin-2-yl)-1H-imidazole ESIPT-ligand

Nikita A. Shekhovtsov, Katerina A. Vinogradova, Sofia N. Vorobyova, Alexey S. Berezin, Victor F. Plyusnin, Dmitry Yu. Naumov, Natalia V. Pervukhina, Elena B. Nikolaenkova, Alexsei Ya. Tikhonov and Mark B. Bushuev  


Dalton Trans., 2022, V. 51, N 25, Pp. 9818-9835,
First published on 01 Jun 2022

 2022_DaltonTrans_Nikolaenkova_Tikhonov

Abstract

The ability of 1-hydroxy-1H-imidazoles to undergo proton transfer processes and to exist in N-hydroxy and N-oxide tautomeric forms can be used in coordination chemistry for the design of ESIPT-capable complexes. A series of ESIPT-capable zinc(II) complexes [Zn(HL)Hal2] (Hal = Cl, Br, I) with a rationally designed ESIPT-ligand 1-hydroxy-5-methyl-2,4-di(pyridin-2-yl)-1H-imidazole (HL) featuring spatially separated metal binding and ESIPT sites have been synthesized and characterized. Crystals of these compounds consist of a mixture of two isomers of [Zn(HL)Hal2]. Only a major isomer has a short intramolecular hydrogen bond O–H⋯N as a pre-requisite for ESIPT. In the solid state, the complexes [Zn(HL)Hal2] demonstrate temperature- and excitation wavelength dependent fluorescence in the cyan region due to the interplay of two intraligand fluorescence channels with excited state lifetimes spanning from 0.2 to 4.3 ns. The coordination of HL by Zn2+ ions results in an increase in the photoluminescence efficiency, and the photoluminescence quantum yields (PLQYs) of the complexes reach 12% at λex = 300 nm and 27% at λex = 400 nm in comparison with the PLQY of free HL of ca. 2%. Quantum chemical calculations indicate that N-hydroxy–N-oxide phototautomerization is both thermodynamically and kinetically favourable in the S1 state for [Zn(HL)Hal2]. The proton transfer induces considerable geometrical reorganizations and therefore results in large Stokes shifts of ca. 230 nm. In contrast, auxiliary ESIPT-incapable complexes [ZnL2][Zn(OAc)2]2·2H2O and [ZnL2][ZnCl2]2·4H2O with the deprotonated ligand exhibit excitation wavelength independent emission in the violet region with the Stokes shift reduced to ca. 130 nm.

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На сайте  журнала Viruses   (IF=5,048) опубликована статья  с участием сотрудников Института: д.х.н. О.И. Яровой (внс, ЛФАВ), к.х.н. А.С. Соколовой (снс ЛФАВ), Е.Д. Мордвиновой (лаборант ЛФАВ), к.х.н. А.Д. Рогачева (снс ЛФАВ)  и чл.-корр. РАН, д.х.н., проф. Н.Ф. Салахутдинова (зав. отделом медицинской химии)


Borneol Ester Derivatives as Entry Inhibitors of a Wide Spectrum of SARS-CoV-2 Viruses

Olga I. Yarovaya, Dmitriy N. Shcherbakov, Sophia S. Borisevich, Anastasiya S. Sokolova, Maxim A. Gureev, Edward M. Khamitov, Nadezda B. Rudometova, Anastasiya V. Zybkina, Ekaterina D. Mordvinova, Anna V. Zaykovskaya, Artem D. Rogachev, Oleg V. Pyankov, Rinat A. Maksyutov and Nariman F. Salakhutdinov

Viruses 202214(6), 1295
Publication Date: Jun 14, 2022


 https://doi.org/10.3390/v14061295

(This article belongs to the Special Issue SARS-CoV-2 and Other Coronaviruses)


Abstract

In the present work we studied the antiviral activity of the home library of monoterpenoid derivatives using the pseudoviral systems of our development, which have glycoproteins of the SARS-CoV-2 virus strains Wuhan and Delta on their surface. We found that borneol derivatives with a tertiary nitrogen atom can exhibit activity at the early stages of viral replication. In order to search for potential binding sites of ligands with glycoprotein, we carried out additional biological tests to study the inhibition of the re-receptor-binding domain of protein S. For the compounds that showed activity on the pseudoviral system, a study using three strains of the infectious SARS-CoV-2 virus was carried out. As a result, two leader compounds were found that showed activity on the Wuhan, Delta, and Omicron strains. Based on the biological results, we searched for the potential binding site of the leader compounds using molecular dynamics and molecular docking methods. We suggested that the compounds can bind in conserved regions of the central helices and/or heptad repeats of glycoprotein S of SARS-CoV-2 viruses. View Full-TextIt is known that epoxide-bearing compounds display pronounced pharmacological activities, and the epoxidation of natural metabolites can be a promising strategy to improve their bioactivity. Here, we report the design, synthesis and evaluation of biological properties of αO-SM and βO-SM, novel epoxides of soloxolone methyl (SM), a cyanoenone-bearing derivative of 18βH-glycyrrhetinic acid. We demonstrated that the replacement of a double-bound within the cyanoenone pharmacophore group of SM with α- and β-epoxide moieties did not abrogate the high antitumor and anti-inflammatory potentials of the triterpenoid. It was found that novel SM epoxides induced the death of tumor cells at low micromolar concentrations (IC50(24h) = 0.7–4.1 µM) via the induction of mitochondrial-mediated apoptosis, reinforced intracellular accumulation of doxorubicin in B16 melanoma cells, probably by direct interaction with key drug efflux pumps (P-glycoprotein, MRP1, MXR1), and the suppressed pro-metastatic phenotype of B16 cells, effectively inhibiting their metastasis in a murine model. Moreover, αO-SM and βO-SM hampered macrophage functionality in vitro (motility, NO production) and significantly suppressed carrageenan-induced peritonitis in vivo. Furthermore, the effect of the stereoisomerism of SM epoxides on the mentioned bioactivities and toxic profiles of these compounds in vivo were evaluated. Considering the comparable antitumor and anti-inflammatory effects of SM epoxides with SM and reference drugs (dacarbazine, dexamethasone), αO-SM and βO-SM can be considered novel promising antitumor and anti-inflammatory drug candidates.


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В журале Hydrometallurgy (IF 4,156) опубликована статья с участием сотрудников Института: д.х.н. А.Я. Тихонова (гнс, ЛГетС),  к.х.н. В.И. Маматюка (внс, ЛМР) и  к.х.н. Е.В.Карповой (снс, рук. группы ГОС)

Recovery of indium from sulfate solutions with D2EHPA in the presence of organic proton-donor additives

Highlights

  • The state of D2EHPA in CCl4 in the presence of proton-donor additives HA was studied.

  • interaction between D2EHPA (HR) and HA was shown to occur.

  • Antagonistic extraction of indium by mixtures of D2EHPA and additives is observed.

  • D2EHPA and 2-ethylhexanol system is most efficient for In extraction and stripping.

 

Abstract

Di(2-ethylhexyl)phosphoric acid (D2EHPA, HR) is widely used for solvent extraction of indium from acidic leaching solutions, but indium stripping from the loaded organic phase is difficult because of the high affinity of indium for the extractant. Adding proton-donor additives (HA) to the D2EHPA solution is a way to achieve high stripping efficiency for indium. In this work, monocarboxylic acids, aliphatic alcohols, and phenol derivatives were used as additives. Nuclear magnetic resonance (NMR) and infrared (IR) spectroscopy of the organic phases confirm the formation of intermolecular associates (H-complexes) between all additives and D2EHPA. In the case of alcohols and substituted phenols, the interaction of oxygen atoms of alcohols or phenols with the proton of the hydroxyl group of D2EHPA is predominant, while in the case of monocarboxylic acids, an interaction between the hydroxyl proton of the acid and the P=O group of D2EHPA mainly occurs. Despite the high In distribution ratio with D2EHPA (100−1000), in all cases investigated the introduction of additives into the organic phase led to an antagonistic extraction effect, however it facilitated efficient In stripping from the loaded organic phase. This effect depends significantly on the type and structure of the additive. Indium extraction in the presence of additives decreases in the series 4-bromophenol >4-t-butylphenol > octanol, 2-ethylhexanol >4-nitrophenol >2-nitrophenol >2,6-di-t-butylphenol, octanoic acid > Versatic 10. Extraction systems containing D2EHPA and 2-ethylhexanol can be used to recover indium from various industrial solutions, in particular, from those derived from lead‑zinc production and from liquid crystal display panel wastes.

 

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В журнале International Journal of Molecular Sciences   (IF=6,208) опубликована статья  с участием сотрудников Института: к.х.н. О.В. Саломатиной (снс, ЛФАВ), Н.И. Комаровой (вед инженер ЛФАВ) и чл.-корр. РАН, д.х.н., проф. Н.Ф. Салахутдинова (зав. отделом медицинской химии)


Novel Epoxides of Soloxolone Methyl: An Effect of the Formation of Oxirane Ring and Stereoisomerism on Cytotoxic Profile, Anti-Metastatic and Anti-Inflammatory Activities In Vitro and In Vivo

Oksana V. Salomatina, Aleksandra V. Sen’kova, Arseny D. Moralev, Innokenty A. Savin, Nina I. Komarova, Nariman F. Salakhutdinov, Marina A. Zenkova and Andrey V. Markov

Int. J. Mol. Sci. 2022, 23(11), 6214
Publication Date: Mayr 1, 2022


 https://doi.org/10.3390/ijms23116214

(This article belongs to the Special Issue Cytotoxicity on Pharmaceutical Interactions in Chemotherapy)


Abstract

It is known that epoxide-bearing compounds display pronounced pharmacological activities, and the epoxidation of natural metabolites can be a promising strategy to improve their bioactivity. Here, we report the design, synthesis and evaluation of biological properties of αO-SM and βO-SM, novel epoxides of soloxolone methyl (SM), a cyanoenone-bearing derivative of 18βH-glycyrrhetinic acid. We demonstrated that the replacement of a double-bound within the cyanoenone pharmacophore group of SM with α- and β-epoxide moieties did not abrogate the high antitumor and anti-inflammatory potentials of the triterpenoid. It was found that novel SM epoxides induced the death of tumor cells at low micromolar concentrations (IC50(24h) = 0.7–4.1 µM) via the induction of mitochondrial-mediated apoptosis, reinforced intracellular accumulation of doxorubicin in B16 melanoma cells, probably by direct interaction with key drug efflux pumps (P-glycoprotein, MRP1, MXR1), and the suppressed pro-metastatic phenotype of B16 cells, effectively inhibiting their metastasis in a murine model. Moreover, αO-SM and βO-SM hampered macrophage functionality in vitro (motility, NO production) and significantly suppressed carrageenan-induced peritonitis in vivo. Furthermore, the effect of the stereoisomerism of SM epoxides on the mentioned bioactivities and toxic profiles of these compounds in vivo were evaluated. Considering the comparable antitumor and anti-inflammatory effects of SM epoxides with SM and reference drugs (dacarbazine, dexamethasone), αO-SM and βO-SM can be considered novel promising antitumor and anti-inflammatory drug candidates.


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В журнале Pharmaceuticals (IF 5,863) опубликована статья с участием сотрудников Института: к.х.н. О.В. Саломатиной (снс, ЛФАВ), А.А. Охиной (мнс, ЛФАВ), к.х.н. А.Д. Рогачева (снс, ЛФАВ) и чл.-корр. РАН, д.х.н., проф. Н.Ф. Салахутдинова (зав. отделом медицинской химии)

Novel Soloxolone Amides as Potent Anti-Glioblastoma Candidates: Design, Synthesis, In Silico Analysis and Biological Activities
In Vitro and In Vivo

 

Abstract

The modification of natural or semisynthetic triterpenoids with amines can be explored as a promising strategy for improving their pharmacological properties. Here, we report the design and synthesis of 11 novel amide derivatives of soloxolone methyl (SM), a cyano enone-bearing derivative of 18βH-glycyrrhetinic acid. Analysis of their bioactivities in vitro and in silico revealed their high toxicity against a panel of tumor cells (average IC50(24 h) = 3.7 µM) and showed that the formation of amide moieties at the C-30 position of soloxolone did not enhance the cytotoxicity of derivatives toward tumor cells compared to SM, though it can impart an ability to pass across the blood–brain barrier. Further HPLC–MS/MS and mechanistic studies verified significant brain accumulation of hit compound 12 (soloxolone tryptamide) in a murine model and showed its high anti-glioblastoma potential. It was found that 12 induced ROS-dependent and autophagy-independent death of U87 and U118 glioblastoma cells via mitochondrial apoptosis and effectively blocked their clonogenicity, motility and capacity to form vessel-like structures. Further in vivo study demonstrated that intraperitoneal injection of 12 at a dosage of 20 mg/kg effectively inhibited the growth of U87 glioblastoma in a mouse xenograft model, reducing the proliferative potential of the tumor and leading to a depletion of collagen content and normalization of blood vessels in tumor tissue. The obtained results clearly demonstrate that 12 can be considered as a promising leading compound for drug development in glioblastoma treatment.

Keywords: soloxolone methylamides18βH-glycyrrhetinic acidbardoxolone methylglioblastomablood–brain barrierantitumor activityapoptosismitochondrial stresstumor microenvironment

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В журнале  Dalton Transactions (IF 4,39) опубликована статья с участием сотрудников Института   П.М. Калетиной (мнс ЛМР), к.х.н. И.К. Шундриной (снс ЛЭАСМ, снс ГТ) и д.ф.-м.н., проф. Е.Г. Багрянской (директор НИОХ):

Hybrid iron(ii) phthalocyaninatoclathrochelates with a terminal reactive vinyl group and their organo-inorganic polymeric derivatives: synthetic approaches, X-ray structures and copolymerization with styrene

Semyon V. Dudkin,  Alexander S. Chuprin, Svetlana A. Belova, Anna V. Vologzhanina,  Yan V. Zubavichus,  Polina M. Kaletina, Inna K. Shundrina, Elena G. Bagryanskaya   and Yan Z. Voloshin   


Dalton Trans., 2022, V. 51, Issue 14, Pages 5645-5659
First published on 09 Mar 2022 

 C9DT043251

Abstract

Hybrid metallo(IV)phthalocyaninate-capped tris-dioximate iron(II) complexes (termed as “phthalocyaninatoclathrochelates”) with non-equivalent apical fragments and functionalized with one terminal reactive vinyl group were prepared for the first time using three different synthetic approaches: (i) transmetallation (capping group exchange) of the appropriate labile boron,antimony-capped cage precursors, (ii) capping of the initially isolated reactive semiclathrochelate intermediate, and (iii) direct one-pot template condensation of their ligand synthons on the iron(II) ion as a matrix. The obtained polytopic cage complexes were characterized using elemental analysis, 1H NMR, MALDI-TOF MS and UV–vis spectra, and the single-crystal X-ray diffraction experiments. One of the obtained vinyl-terminated iron(II) phthalocyaninatoclathrochelates and its semiclathrochelate precursor were tested as monomers in a copolymerization reaction with styrene as the main component. These vinyl-terminated (semi)clathrochelate iron(II) complexes were found to be successfully copolymerized with this industrially important monomer, affording the intensely colored copolymer products. Because of a low solubility of the tested zirconium(IV) phthalocyaninate-capped tris-nioximate monomer in styrene as a solvent, a molar ratio of 1 : 500 was used. The obtained copolymer products and the kinetics of their formation were studied using GPC, FTIR, UV–vis, TGA and DSC methods. Even at such a low concentration of the Fe,Zr-binuclear metallocomplex component, an increase in the rate of the UV-light degradation of the organo-inorganic products, as well as in their thermal stability, was observed.

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В журнале Journal of Luminescence (IF 3,599) опубликована статья с участием сотрудников
Института: М.А.Панфилова (аспирант, м.н.с. ЛФ) и к.х.н. А.Ю. Воробьева (зав.лаб, с.н.с ЛФ)

Photophysical properties of BODIPYs with sterically-hindered nitrophenyls in meso-position

Mikhail A.Panfilov, Tatyana Yu. Karogodina, Yao Songyin, Oleg Yu. Karmatskih, Alexey Yu. Vorob'ev, Irina S.Tretyakova, Evgeni M.Glebov, Alexander E.Moskalensky

Journal of Luminescence, V. 246, June 2022, 118837

Available online 22 March 2022



 https://doi.org/10.1016/j.jlumin.2022.118837


Highlights

  • We describe a new family of BODIPY dyes with sterically-hindered nitrophenyls in meso-position.

  • Photonic properties of novel compounds are characterized, including the fluorescent quantum yield and lifetime and photoinduced singlet oxygen luminescence.

  • Drastically different results are obtained for molecules with only small changes in substituents.

  • The influence of molecular structure on the optical properties is investigated and explained with quantum chemical calculations.


 

Abstract

During recent years, the BODIPY core became a popular scaffold for designing of dyes with desirable properties. In this paper, we extend the library of possible modification of BODIPYs, presenting experimental data for a new family meso-substituted with nitrophenyl groups. We also present quantum chemical calculations, which complement the experimental data and give additional insight in the underlying photochemical and photophysical processes. Optical properties of novel compounds are characterized. It is shown that the fluorescence quantum yield and the efficiency of singlet oxygen generation differs by two orders of magnitude across the family. In aqueous solution, red-shifted fluorescence emission band is detected, corresponding to aggregates. This band has shorter decay time and wide excitation spectrum. We show that photolysis is not accompanied by the release of nitric oxide (NO) which was observed earlier for some dyes with nitrophenyl substituents. The experimental data presented in this paper may be useful for further designing of BODIPY dyes and NO photodonors.

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На сайте журнала  Advanced Electronic Materials,   (IF 7,295) опубликована статья с участием сотрудников Института:  - к.х.н.М.С. Казанцева (завлаб ЛОЭ) и к.х.н. А.А. Сониной (снс, ЛОЭ))

Luminescent High-Mobility 2D Organic Semiconductor Single Crystals

Roman S. Fedorenko, Alexey V. Kuevda, Vasiliy A. Trukhanov, Vladislav G. Konstantinov, Andrey Yu. Sosorev, Alina A. Sonina, Maxim S. Kazantsev, Nikolay M. Surin,Souren Grigorian,Oleg V. Borshchev,Sergey A. Ponomarenko,Dmitry Yu. Paraschuk

Advanced Electronic Materials,

First published: 11 March 2022

doi: 10.1002/aelm.202101281

 

Abstract

2D organic semiconductor single crystals comprising one or a few molecular layers of macroscopic lateral sizes are ideal materials for ultrathin, flexible, and transparent field-effect devices—a platform for transistors and sensors. In recent years, these 2D materials have demonstrated high performance not inferior to their 3D counterparts. However, light emissive properties of 2D organic semiconductor single crystals have not yet been reported, and a combination of high charge-carrier mobility and bright luminescence in one material is still a challenge for 2D organic optoelectronics. Emissive high-mobility 2D organic semiconductor based on a [1]benzothieno[3,2-b]benzothiophene (BTBT)-derivative, 2,7-bis(4-decylphenyl)[1]benzothieno[3,2-b][1]benzothiophene (DPBTBT), is presented here. DPBTBT molecules self-organize in large-area ultrathin single-crystalline films consisting of one or a few molecular layers. These 2D single crystals perfectly suit as an active layer of organic field-effect transistors in full accordance with Shockley's model and uniquely combine the high charge-carrier mobility reaching 7.5 cm2 V–1 s–1 with prominent light emissive properties, which allow a demonstration of the first 2D organic light-emitting transistor. The high charge-carrier mobility and thermal stability of the crystalline phases, pronounced luminescence, and good shelf-life stability suggest that emissive BTBT-type molecules are a promising avenue for 2D organic optoelectronics.

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В журнале  Physical Chemistry Chemical Physics,   (IF 3,945) опубликована статья с участием сотрудников Института:  Н.Б. Асанбаевой (мнс, ЛМР), к.х.н. О.Ю. Рогожниковой (снс, ГИТР), к.х.н. Д.В. Трухина(снс, ГИТР), к.х.н. В.М. Тормышева(снс, рук. ГИТР), к.х.н. А.Н Марьясова (снс, ЛМР), к.х.н. А.М. Генаева (снс, ЛМР), к.х.н. А.В. Шернюкова (снс, ЛМР), Г.Е. Сальникова (снс, ЛМР)  и д.ф.-м.н., проф. Е.Г. Багрянской (Директор НИОХ)

Application of W-band 19F electron nuclear double resonance (ENDOR) spectroscopy to distance measurement using a trityl spin probe and a fluorine label

N. B. Asanbaeva, A. A. Sukhanov, A. A. Diveikina, O. Y. Rogozhnikova, D. V. Trukhin, V. M. Tormyshev, A. S. Chubarov,  A. G. MaryasovA. M. Genaev, A. V. Shernyukov, G. E. Salnikov, A. A. Lomzov,  D. V. Pyshnyi and E. G. Bagryanskaya

Phys. Chem. Chem. Phys., 2022, 24(10), 5982-6001,

First published on 18 Feb 2022

doi: 10.1039/D1CP05445G

2022_01_PHHP_Bagr.jpg

 

Abstract

Recently, Marina Bennati and coworkers (M. Bennati et al.Angew. Chem., Int. Ed., 2020, 59, 373–379., M. Bennati et al.J. Magn. Reson., 2021, 333, 107091) proposed to use electron nuclear double resonance (ENDOR) spectroscopy in the W-band for a pair of labels, nitroxide and 19F, for measurements of short (0.5–1.0 nm) distances in biomolecules. In our paper, we investigated the suitability of high-field ENDOR spectroscopy in the W-band for pairs of triarylmethyl and fluorine labels using five newly synthesized model compounds. It is shown that the application of strong magnetic fields allows distinguishing nuclear frequencies of 19F and protons with sufficient resolution. On the one hand, in contrast to nitroxides, for triarylmethyl radicals, it is not necessary to obtain spectra in different orientations owing to low g-factor anisotropic and long electron spin relaxation times of triarylmethyls. On the other hand, the size of the triarylmethyl radical is substantially larger than that of nitroxide and comparable with measured distances. We theoretically analyzed the suitability of the dipole–dipole approach for triarylmethyl to be used in a 19F ENDOR experiment and determined limitations of this approach. Finally, for comparison, we performed paramagnetic relaxation enhancement (PRE) NMR on the same compounds. In addition, we applied this approach to study the process of a thiol exchange between molecules of triarylmethyl-labeled and 19F-labeled human serum albumin (HSA).

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В журнале Toxics,  (IF 4,146) опубликована статья с участием сотрудников Института  -

к.х.н. О.В. Ардашова (снс, ЛФАВ), д.х.н., проф. РАН К.П. Волчо (гнс, ЛФАВ)  и чл.-корр. РАН, д.х.н., проф. Н.Ф. Салахутдинова (зав. отделом медицинской химии)

MPTP-Treated Zebrafish Recapitulate ‘Late-Stage’ Parkinson’s-like Cognitive Decline

Alim A. O. Bashirzade, Sergey V. Cheresiz, Alisa S. Belova, Alexey V. Drobkov, Anastasiia D. Korotaeva, Soheil Azizi-Arani, Amirhossein Azimirad, Eric Odle, Emma-Yanina V. Gild, Oleg V. Ardashov, Konstantin P. Volcho, Dmitrii V. Bozhko, Vladislav O. Myrov, Sofia M. Kolchanova, Aleksander I. Polovian, Georgii K. Galumov, Nariman F. Salakhutdinov, Tamara G. Amstislavskaya and Allan V. Kalueff


Toxics 202210(2), 69,
Publication Date :February 04, 2022

 https://doi.org/10.3390/toxics10020069

 
(This article belongs to the Special Issue Fish Models for Human Toxicology)

Abstract

The zebrafish is a promising model species in biomedical research, including neurotoxicology and neuroactive drug screening. 1-Methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP) evokes degeneration of dopaminergic neurons and is commonly used to model Parkinson’s disease (PD) in laboratory animals, including zebrafish. However, cognitive phenotypes in MPTP-evoked experimental PD models remain poorly understood. Here, we established an LD50 (292 mg/kg) for intraperitoneal MPTP administration in adult zebrafish, and report impaired spatial working memory (poorer spontaneous alternation in the Y-maze) in a PD model utilizing fish treated with 200 µg of this agent. In addition to conventional behavioral analyses, we also employed artificial intelligence (AI)-based approaches to independently and without bias characterize MPTP effects on zebrafish behavior during the Y-maze test. These analyses yielded a distinct cluster for 200-μg MPTP (vs. other) groups, suggesting that high-dose MPTP produced distinct, computationally detectable patterns of zebrafish swimming. Collectively, these findings support MPTP treatment in adult zebrafish as a late-stage experimental PD model with overt cognitive phenotypes. View Full-Text

 

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В журнале The Journal of Organic Chemistry,  (IF 4,354I) опубликована статья с участием сотрудников Института  - к.х.н.М.С. Казанцева (завлаб ЛОЭ) и к.х.н. А.А. Сониной (снс, ЛОЭ):

P2O5-Promoted Cyclization of Di[aryl(hetaryl)methyl] Malonic Acids as a Pathway to Fused Spiro[4.4]nonane-1,6-Diones

Konstantin S. Ivanov, Tim Riesebeck, Alexandrina Skolyapova, Irina Liakisheva, Maxim S. Kazantsev , Alina A. Sonina, Roman Yu Peshkov, and Evgeny A. Mostovich

J. Org. Chem. 2022, 87, 5, 2456–2469,
Publication Date (Web):February 15, 2022

 https://doi.org/10.1021/acs.joc.1c02379





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Abstract

Conventional spiro-linked conjugated materials are attractive for organic optoelectronic applications due to the unique combination of their optical and electronic properties. However, spiro-linked conjugated materials with conjugation extension directed along the main axis of the molecule are still only rare examples among the vast number of spiro-linked conjugated materials. Herein, the synthesis, leading to π-extended spiro-linked conjugated materials─spiro[4.4]nonane-1,6-diones and spiro[5.5]undecane-1,7-diones─has been developed and optimized. The proposed design concept starts from readily available malonic esters and contains several steps: double alkylation of malonic ester with bromomethylaryl(hetaryl)s; conversion of a malonic ester into the corresponding malonic acid; electrophilic spirocyclization of the latter into the annulated spiro[4.4]nonane-1,6-dione or spiro[5.5]undecane-1,7-dione in the presence of phosphorus pentoxide. On the basis of these insights, the developed method yielded spiro-linked conjugated cores fused with benzene, thiophene, and naphthalene, decorated with active halogen atoms. The structures of the synthesized spirocycles were determined by single-crystal X-ray diffraction analysis. Benzene fused spiro[4.4]nonane-1,6-dione decorated with bromine atoms was transformed into V-shape phenylene-thiophene co-oligomer type spirodimers via Stille coupling. The spiro-bis(4-n-dodecylphenyl)-2,2′-bithiophene derivative possessed high photoluminescence properties in both solution and solid state with a photoluminescence quantum yield (PL QY) of 38%.

 

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В журнале  Physical Chemistry Chemical Physics,   (IF 3,945) опубликована статья с участием сотрудников Института:  к.х.н. Л.В. Политанской (завлаб, ЛИНИРР), к.х.н. Ю.Ф. Полиенко (снс. ЛАС), к.х.н. В.М. Тормышева (снс, рук. ГИТР) и д.ф.-м.н., проф. Е.Г. Багрянской (Директор НИОХ)

Fullerene-based triplet spin labels: methodology aspects for pulsed dipolar EPR spectroscopy

Ivan O. Timofeev, Larisa V. Politanskaya, Evgeny V. Tretyakov, Yuliya F. Polienko, Victor M. Tormyshev, Elena G. Bagryanskaya, Olesya A. Krumkacheva and Matvey V. Fedin

Phys. Chem. Chem. Phys., 2022, 24 (7), 4475-4484,
First published on 19 Jan 2022

doi: 10.1039/D1CP05545C

2022_01_PHHP_Bagr.jpg

 

Abstract

Triplet states of photoexcited organic molecules are promising spin labels with advanced spectroscopic properties for pulsed dipolar electron paramagnetic resonance (PD EPR) spectroscopy. Recently proposed triplet fullerene labels have shown great potential for double electron–electron resonance (DEER) distance measurements as “observer spins” due to a high quantum yield of the triplet state, hyperpolarization and relatively narrow EPR spectra. Here, we demonstrate the applicability of fullerene labels to other PD EPR techniques, such as relaxation induced dipolar modulation enhancement (RIDME) and laser induced magnetic dipolar spectroscopy (LaserIMD). In particular, a specific contaminating signal in LaserIMD experiments was observed, explained and mitigated. Comparative analyses of the signal-to-noise (SNR) ratios were performed for all employed methods. DEER on the fullerene–triarylmethyl pair shows the best performance, which allows state-of-the-art DEER acquisition at 100 nM with a SNR of ∼35 within reasonable 42 hours.

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